#Accelerator_mass_spectrometry JERM:00120 #Accelerator_mass_spectrometry Accelerator Mass Spectrometry #Activity JERM:110001 #Activity Activity #Affinity_chromatography Affinity chromatography is based on selective non-covalent interaction between an analyte and specific molecules. It is often used in biochemistry in the purification of proteins bound to tags. These fusion proteins are labeled with compounds such as His-tags, biotin or antigens, which bind to the stationary phase specifically. #Affinity_chromatography JERM:00110 #Affinity_chromatography affinity_purification #Affinity_chromatography Affinity Chromatography #Algebraic_equation JERM:00139 #Algebraic_equation Algebraic Equation #Amplification e.g. RT_PCR to amplify DNA from RNA #Amplification JERM:000007 #Amplification Amplification #Assay An assay is a combination of a process (experiment) and a protocol. #Assay JERM:00021 #Assay Assay #Assay_type An assay type describes the type of experiment being performed #Assay_type JERM:00024 #Assay_type The assay_type hierarchy allows scientists to categorise their experimental assays, informatics analyses and computational models #Assay_type Assay Type #Asset all shareable entities in the SEEK are kinds of Assets #Asset JERM:00010 #Asset Asset #Bait_protein_tagging JERM:00135 #Bait_protein_tagging Bait Protein Tagging #Batch A large-scale closed system culture in which cells are grown in a fixed volume of nutrient culture medium under specific environmental conditions #Batch JERM:021 #Batch Batch #Binding laboratory techniques which involve separation by binding the molecules of interest #Binding JERM:00094 #Binding Binding #Bioinformatics_analysis a bioinformatics analysis is an "assay" performed in silico, employing bioinformatics techniques to analyse biological data #Bioinformatics_analysis JERM:00046 #Bioinformatics_analysis Bioinformatics Analysis #Biological_entity JERM:40012 #Biological_entity Biological Entity #Buffer JERM:011 #Buffer Buffer #By-product_formation JERM:004 #By-product_formation By-product Formation #Capillary_electrophoresis JERM:00113 #Capillary_electrophoresis Capillary Electrophoresis #Catabolic_response JERM:00068 #Catabolic_response Catabolic Response #CellML JERM:40020 #CellML CellML #Cell_count Cell Count #Cell_cycle JERM:00048 #Cell_cycle Cell Cycle #Cell_growth_optimisation JERM:00066 #Cell_growth_optimisation Cell Growth Optimisation #Cell_growth_rate JERM:00151 #Cell_growth_rate Cell Growth Rate #Cell_line JERM:00201 #Cell_line Cell Line #Cell_size JERM:006 #Cell_size Cell Size #ChIP-on-chip JERM:00130 #ChIP-on-chip Chromatin Immunoprecipitation on Chip #ChIP-on-chip ChIP-on-chip #Characteristics_for_assay JERM:00155 #Characteristics_for_assay Characteristics for Assay #Characteristics_for_sample JERM:00156 #Characteristics_for_sample Characteristics for Sample #Cheminformatics_analysis a cheminformatics analysis is an "assay" performed in silico, employing cheminformatics techniques to analyse biological data #Cheminformatics_analysis JERM:00047 #Cheminformatics_analysis Cheminformatics Analysis #Chemostat a bioreactor to which fresh medium is continuously added, while culture liquid is continuously removed to keep the culture volume constant. #Chemostat JERM:022 #Chemostat Chemostat #Chemostat_measurements JERM:00184 #Chemostat_measurements Chemostat Measurement #Chip-Seq JERM:018 #Chromatography Chromatography is the collective term for a set of laboratory techniques for the separation of mixtures. It involves passing a mixture dissolved in a "mobile phase" through a stationary phase, which separates the analyte to be measured from other molecules in the mixture based on differential partitioning between the mobile and stationary phases. #Chromatography JERM:00095 #Chromatography Chromatography #Collision_cell JERM:50003 #Collision_cell Collision Cell #Community_standard_specification JERM:00192 #Community_standard_specification Community Standard Specification #Comparative_genomic_hybridization JERM:00086 #Comparative_genomic_hybridization Comparative Genomic Hybridization #Comparative_genomics JERM:00060 #Comparative_genomics Comparative Genomics #Compound JERM:015 #Compound Compound #Concentration JERM:00031 #Concentration Concentration #Continuous_enzymatic JERM:008 #Continuous_enzymatic Continuous Enzymatic #Cultivation_experiment JERM:00216 #Cultivation_experiment Cultivation Experiment #CultureGrowthType Experiments can be performed on cell cultures, so it is essential to record the type of culture in use each time #CultureGrowthType JERM:00026 #CultureGrowthType Culture Growth Type #Custom_Array JERM:00132 #Custom_Array Custom Array #DNA_Methylation JERM:00131 #DNA_Methylation DNA Methylation #DNA_sequencing JERM:00058 #DNA_sequencing DNA Sequencing #Data SEEK data files #Data JERM:00011 #Data Data #Data_file_format JERM:00038 #Data_file_format Data File Format #Data_sample An electronic description of a sample that can be used to derive a physical sample, for example a DNA sequence #Data_sample JERM:00144 #Data_sample Data Sample #Detectors JERM:50004 #Detectors Detectors #Dilution_rate Dilution Rate #Discontinuous_enzymatic JERM:009 #Discontinuous_enzymatic Discontinuous Enzymatic #Dry_biomass JERM:00037 #Dry_biomass Dry Biomass #ELISA JERM:00188 #ELISA ELISA #Electron_scanning_microscopy JERM:00186 #Electrophoresis Electrophoresis is the motion of dispersed particles relative to a fluid under the influence of a spatially uniform electric field #Electrophoresis JERM:00096 #Electrophoresis Electrophoresis #ElectrosprayIonisation JERM:50000 #ElectrosprayIonisation Electrospray Ionisation #Enzymatic_activity_measurements JERM:00097 #Enzymatic_activity_measurements Enzymatic Activity Measurements #Enzymatic_assay JERM:00083 #Enzymatic_assay Enzymatic Assay #Enzyme JERM:501000 #Enzyme Enzyme #Enzyme_activity JERM:012 #Enzyme_activity Enzyme Activity #Enzymology JERM:00049 #Enzymology Enzymology #Equipment tools or machines used in the laboratory, or computer hardware or software used for data analysis #Equipment JERM:90004 #Equipment Equipment #Exon_array JERM:50015 #Exon_array Exon Array #Experimental_assay_type JERM:00043 #Experimental_assay_type An experimental assay is an assay carried out in a laboratory #Experimental_assay_type Experimental Assay Type #Experimental_design_type JERM:58493 #Experimental_design_type Experimental Design Type #Experimental_factor_type JERM:26754 #Experimental_factor_type Experimental Factory Type #Experimental_factors ExperimentalFactors are descriptors of the properties of the experiment. How the culture was prepared, what organism they are from, and what type of experiment was run #Experimental_factors JERM:00017 #Experimental_factors Experimental Factors #Expression JERM:00033 #Expression Expression #Expression_value_measurement_type JERM:20946 #Expression_value_measurement_type Expression Value Measurement #Extracellular_concentration JERM:000001 #Extracellular_concentration Extracellular Concentration #Extracellular_metabolite_concentration JERM:00149 #Extracellular_metabolite_concentration Extracellular Metabolite Concentration #FACS Fluorescence Activated Cell Sorting #FACS JERM:90002 #FACS FACS #FRAP JERM:00119 #FRAP fluorescence recovery after photobleaching #FRAP FRAP #FT-ICR JERM:50005 #FT-ICR FT-ICR #Factors_studied factors studied describe what types of measurements were taken (i.e. what factors were expected to change during the experiment) #Factors_studied JERM:00027 #Factors_studied also known as ExperimentalConditions when used to set up initial conditions for an experiment/assay #Factors_studied Factors Studied #Flow_cytometry JERM:90003 #Flow_cytometry Flow Cytometry #Flux_balance_analysis a method for analysing the flow of metabolites through metabolic networks #Flux_balance_analysis JERM:00069 #Flux_balance_analysis Flux Balance Analysis #Fluxomics the dynamic changes of molecules within a cell over time #Fluxomics JERM:00056 #Fluxomics Fluxomics #Format JERM:00018 #Format Format #Functional_biological_entity JERM:40014 #Functional_biological_entity Functional Biological Entity #Gas_chromatography Gas chromatography (GC) is a separation technique in which the mobile phase is a gas #Gas_chromatography JERM:00111 #Gas_chromatography Gas Chromatography #Gas_chromatography_mass_spectrometry JERM:00121 #Gas_chromatography_mass_spectrometry Gas Chromatography Mass Spectrometry #Gas_flow JERM:110002 #Gas_flow Gas Flow #Gel_electrophoresis JERM:00114 #Gel_electrophoresis Gel Electrophoresis #Gel_filtration Size exclusion chromatography (SEC), also known as gel permeation chromatography or gel filtration chromatography, separates particles on the basis of size. It is generally a low resolution chromatography and thus it is often reserved for the final, "polishing" step of a purification. It is also useful for determining the tertiary structure and quaternary structure of purified proteins. #Gel_filtration JERM:00112 #Gel_filtration size_exclusion_chromatography #Gel_filtration Gel Filtration #Gene JERM:40015 #Gene Gene #Gene_expression JERM:00050 #Gene_expression Gene Expression #Gene_expression_profiling analysing the gene expression across an organism in particular environmental conditions #Gene_expression_profiling JERM:00088 #Gene_expression_profiling Gene Expression Profiling #Gene_regulatory_network JERM:00051 #Gene_regulatory_network Gene Regulatory Network #Genome JERM:00202 #Genome Genome #Genome-scale_enzyme_activity_profiling JERM:00081 #Genome-scale_enzyme_activity_profiling Genome-scale Enzyme Activity Profiling #Genome_scale JERM:010 #Genome_scale Genome Scale #Genome_wide_association JERM:00209 #Genome_wide_association Genome Wide Association #Genomics the study of the genome of an organism #Genomics JERM:00057 #Genomics Genomics #Genotyping JERM:00061 #Genotyping Genotyping #Glucose_pulse JERM:00070 #Glucose_pulse Glucose Pulse #Growth_medium_composition JERM:013 #Growth_medium_composition Growth Medium Composition #Growth_rate JERM:00181 #Growth_rate Growth Rate #HPLC High Performance Liquid Chromatography. Liquid chromatography (LC) is a separation technique in which the mobile phase is a liquid #HPLC JERM:00108 #HPLC High Performance Liquid Chromatography #HPLC HPLC #Hybridization JERM:44538 #Hybridization Hybridization #Imaging JERM:00098 #Imaging Imaging #Immune_precipitation JERM:00073 #Immune_precipitation Immune Precipitation #Immuno_electron_microscopy JERM:00189 #Immuno_electron_microscopy Immuno Electron Microscopy #Immunoassay JERM:00147 #Immunoassay Immunoassay #Immunostaining JERM:00187 #Immunostaining Immunostaining #Inductively_coupled_plasma_mass_spectrometry JERM:00122 #Inductively_coupled_plasma_mass_spectrometry Inductively Coupled Plasma Mass Spectrometry #Information_entity JERM:00143 #Information_entity Information Entity #Initial_rate_experiment JERM:00117 #Initial_rate_experiment Initial Rate Experiment #Inoculation_density JERM:00182 #Inoculation_density Inoculation Density #Instrument machines or tools used in laboratory experiments #Instrument JERM:40004 #Instrument Instrument #Interactomics the study of the network of interactions between proteins, metabolites and other biological objects in the cell, and the consequences of those interactions #Interactomics JERM:00063 #Interactomics Interactomics #Intracellular_concentration JERM:000002 #Intracellular_concentration Intracellular Concentration #Intracellular_metabolite_Concentration JERM:00150 #Intracellular_metabolite_Concentration Intracellular Metabolite Concentration #Investigation A high level description of the experimental work undertaken #Investigation JERM:00022 #Investigation Investigation #Ion_mobility_spectrometry_mass_spectrometry JERM:00123 #Ion_mobility_spectrometry_mass_spectrometry Ion Mobility Spectrometry Mass Spectrometry #Ion_optics JERM:50006 #Ion_optics Ion Optics #Ion_trap JERM:50007 #Ion_trap Ion Trap #Ionization_source JERM:40009 #Ionization_source Ionization Source #Isotope_ratio_mass_spectrometry JERM:00124 #Isotope_ratio_mass_spectrometry Isotope Ratio Mass Spectrometry #Label JERM:24776 #Label Label #Limited_media_growth JERM:007 #Limited_media_growth Limited Media Growth #Linear_equation JERM:00140 #Linear_equation Linear Equation #Liquid_chromatography-tandem_mass_spectrometry JERM:00129 #Liquid_chromatography-tandem_mass_spectrometry Liquid Chromatography-tandom Mass Spectrometry #Liquid_chromatography_mass_spectrometry JERM:00125 #Liquid_chromatography_mass_spectrometry Liquid Chromatography Mass Spectrometry #MAGE-TAB JERM:91021 #MAGE-TAB MAGE-TAB #MAGEML JERM:30184 #MAGEML MAGEML #MALDI JERM:50001 #MALDI MALDI #MALDI_TOF JERM:00126 #MALDI_TOF MALDI-TOF #Mass JERM:00030 #Mass Mass #Mass_spec_file_format JERM:40018 #Mass_spec_file_format Mass Spectrometry File Format #Mass_spectrometry Mass spectrometry (MS) is an analytical technique for the determination of the elemental composition of a sample or molecule. It is used for elucidating the chemical structures of peptides and sometimes other chemical compounds #Mass_spectrometry JERM:00099 #Mass_spectrometry Mass Spectrometry #Material_entity JERM:00198 #Material_entity Material Entity #Mathematical_model_type JERM:00103 #Mathematical_model_type Mathematical Model Type #Measured_item the entity under investigation (e.g. glucose) #Measured_item JERM:00028 #Measured_item Measured Item #Metabolic_network JERM:00052 #Metabolic_network Metabolic Network #Metabolic_redesign JERM:00153 #Metabolic_redesign Metabolic Redesign #Metabolism JERM:00054 #Metabolism Metabolism #Metabolite JERM:016 #Metabolite Metabolite #Metabolite_concentration JERM:00148 #Metabolite_concentration Metabolite Concentration #Metabolite_profiling JERM:00067 #Metabolite_profiling Metabolite Profiling #Metabolomics the analysis of metabolism and the dynamic changes in concentration of small molecules and metabolites in different conditions #Metabolomics JERM:00065 #Metabolomics Metabolomics #Metabonomics JERM:00071 #Metabonomics quantitative metabolomics #Metabonomics Metabonomics #Metagenomics JERM:00208 #Metagenomics Metagenomics #Methylation_profiling JERM:00091 #Methylation_profiling Methylation Profiling #Micro-electrophoresis JERM:00213 #Micro-electrophoresis Micro-electrophoresis #MicroRNA_profiling JERM:00092 #MicroRNA_profiling MicroRNA Profiling #Microarray JERM:00100 #Microarray Microarray #Microarray_factors JERM:38539 #Microarray_factors Micorarray Factors #Microarray_file_format JERM:37735 #Microarray_file_format Microarray File Format #Microscopy JERM:00185 #Microscopy Microscopy #Model computational models developed by SEEK consortium members #Model JERM:00012 #Model Model #Model_analysis_type a model analysis type is a model "assay" type to classify the information contained within the model. The categories correspond to the existing categories in JWS Onnline, a tool for model simmulation #Model_analysis_type JERM:00044 #Model_analysis_type Model Analysis Type #Model_execution_environment JERM:00039 #Model_execution_environment Model Execution Environment #Model_format JERM:00040 #Model_format Model Format #Molecule_labelling techniques for labelling molecules to allow them to be detected in laboratory analyses #Molecule_labelling JERM:00101 #Molecule_labelling Molecule Labelling #NMR JERM:00138 #NMR NMR #Nature_protocols JERM:00042 #Nature_protocols Nature Protocols #Next_generation_sequencing JERM:020 #Next_generation_sequencing_analysis JERM:002 #Next_generation_sequencing_analysis Next Generation Sequencing Analysis #Normalization_method JERM:62033 #Normalization_method Normalization Method #Optical_density absorption #Optical_density JERM:00034 #Optical_density Optical Density #Optical_density_600 JERM:014 #Optical_density_600 Optical Density 600 #Orbitrap_velos JERM:00214 #Orbitrap_velos Orbitrap Velos #Ordinary_differential_equation JERM:00141 #Ordinary_differential_equation Ordinary Differential Equation #Organism JERM:00029 #Organism Organism #Organism_colony JERM:00205 #Organism_colony Organism Colony #Organism_or_strain_characterisation experiments to differentiate between different species or strains by their functional properties or genetic profiles #Organism_or_strain_characterisation JERM:003 #Organism_or_strain_characterisation Organism or Strain Characteristics #PCR the polymerase chain reaction (PCR) is a technique to amplify a single or few copies of a piece of DNA across several orders of magnitude, generating thousands to millions of copies of a particular DNA sequence. #PCR JERM:00093 #PCR PCR #Partial_differential_equation JERM:00142 #Partial_differential_equation Partial Differential Equation #Pathway JERM:40016 #Pathway Pathway #Peptide JERM:50020 #Peptide Peptide #Person a SEEK consortium member #Person JERM:00019 #Person Person #Physical_file_format JERM:00193 #Physical_file_format Physical File Format #Post-translational_modification JERM:00074 #Post-translational_modification Post-translational Modification #Post_source_component JERM:50002 #Post_source_component Post Source Component #Post_translational_modification JERM:00212 #Post_translational_modification Post Translational Modification #Pressure JERM:90001 #Pressure Pressure #Pressure pressure #Primer_design JERM:00062 #Primer_design Primer Design #Programme Multiple scientific investigations from the same funding initiative #Programme Programme #Progressive_curve_experiment JERM:00118 #Progressive_curve_experiment Progressive Curve Experiment #Project Scientific investigations into a particular biological or computational research question, involving one or more research groups #Project JERM:00020 #Project Project #Protein JERM:40017 #Protein Protein #Protein-protein_interaction JERM:00075 #Protein-protein_interaction Protein-protein Interaction #Protein-protein_interaction_profiling JERM:00064 #Protein-protein_interaction_profiling Protein-Protein Interaction Profiling #Protein_expression_profiling JERM:00076 #Protein_expression_profiling Protein Expression Profiling #Protein_identification JERM:00077 #Protein_identification Protein Identification #Protein_purification JERM:00078 #Protein_purification Protein Purification #Protein_quantification JERM:00152 #Protein_quantification Protein Quantification #Protein_structural_analysis JERM:00079 #Protein_structural_analysis Protein Structural Analysis #Proteomics Proteomics is the study of the function and structure of proteins in an organism, predominantly using high-throughput techniques #Proteomics JERM:00072 #Proteomics Proteomics #Proteomics_factors JERM:40008 #Proteomics_factors Proteomics Factors #Proteomics_file_format JERM:40017 #Proteomics_file_format Proteomics File Format #Protocol The specification of a laboratory or computational procedure that contains enough detail to enable scientists to rerun that procedure or at least understand and evaluate the method #Protocol JERM:00145 #Protocol Protocol #Publication publication abstracts relating to other SEEK assets #Publication JERM:00014 #Publication Publication #Quality_control_type JERM:87160 #Quality_control_type Quality Control Type #Quantitation JERM:50009 #Quantitation Quantitation #RNA-Seq JERM:019 #RNA-seq_profiling RNA-SEQ, or Whole Transcriptome Shotgun Sequencing, allows the sequencing of cDNA in order to deterimine RNA content. RNA-Seq_analysis are experiments that make use of such data. #RNA-seq_profiling JERM:001 #RNA-seq_profiling RNA-seq Profiling #RNAi experiments involving RNA Interference #RNAi JERM:00087 #RNAi RNAi #Radioactive_labelling JERM:00136 #Radioactive_labelling Radioactive Labelling #Reactomics the study of biochemical reactions in the cell #Reactomics JERM:00080 #Reactomics Reactomics #Replicate_type JERM:50925 #Replicate_type Replicate Type #SBML_format JERM:40021 #SBML_format SBML #SBML_model Computational models in SBML format #SBML_model JERM:40003 #SDS_PAGE JERM:00116 #SDS_PAGE sodium dodecyl sulfate polyacrylamide gel electrophoresis #SDS_PAGE SDS-PAGE #SELDI_TOF JERM:00127 #SELDI_TOF SELDI-TOF #SNP_array JERM:50017 #SNP_array SNP Array #SNP_detection JERM:00059 #SNP_detection SNP Detection #SOP Standard operating procedures and protocols - experimental methods that have been agreed and standardised across a project or organisation #SOP JERM:00015 #SOP SOP #SOP_file_format JERM:00041 #SOP_file_format SOP File Format #Sample JERM:69863 #Sample Sample #Sample_preparation_protocol describes the treatments and conditions applied at the time of sampling #Sample_preparation_protocol JERM:00146 #Sample_preparation_protocol Sample Preperation Protocol #Sequencing techniques for determining the DNA or protein sequence #Sequencing JERM:017 #Sequencing Sequencing #Signal_transduction JERM:00053 #Signal_transduction Signal Induction #Simulation_data JERM:00217 #Simulation_data Simulation Data #Single_Nucleotide_Polymorphism JERM:00166 #Single_Nucleotide_Polymorphism Single Nucleotide Polymorphism #Single_cell analysing the response of single cells to stimuli and perturbations by fluorescence and imaging #Single_cell JERM:00084 #Single_cell Single Cell #Small_molecule_microarray JERM:00134 #Small_molecule_microarray Small Molecule Microarray #Software computer programs used for data analysis or curation #Software JERM:40005 #Software Software #Specific_concentration JERM:00032 #Specific_concentration Specific Concentration #Spectrophotometry JERM:00191 #Spectrophotometry Spectrophotometry #Spectrum_generation JERM:40010 #Spectrum_generation Spectrum Generation #Spectrum_interpretation JERM:40011 #Spectrum_interpretation Spectrum Interpretation #Strain JERM:00204 #Strain Strain #Stress_response Stress_response or adaptation #Stress_response JERM:00154 #Stress_response Stress Response #Structural_methods JERM:00102 #Structural_methods Structural Methods #Study a collection of experiments designed to answer a particular biological question #Study JERM:00023 #Study Study #Substrate_utilization JERM:005 #Substrate_utilization Substrate Utilization #Surface_plasmon_resonance JERM:00107 #Surface_plasmon_resonance Surface Plasmon Resonance #Tandem_mass_spectrometry JERM:00128 #Tandem_mass_spectrometry Tandem Mass Spectrometry #Technology_type describes the technologies and/or techniques used in performing experiments #Technology_type JERM:00025 #Technology_type Technology Type #Temperature JERM:00036 #Temperature Temperature #Tiling_array JERM:50016 #Tiling_array Tiling Array #Tiling_path JERM:00092 #Tiling_path Tiling Path #Time_of_flight_drift_tube JERM:50008 #Time_of_flight_drift_tube Time of Flight Drift Tube #Time_series JERM:00183 #Time_series Time Series #Transcriptional_analysis JERM:00211 #Transcriptional_analysis Transcriptional Analysis #Transcriptional_profiling also called cDNA Microarray #Transcriptional_profiling JERM:00089 #Transcriptional_profiling Transcriptional Profiling #Transcriptomics The study of the transcriptome, the complete set of RNA transcripts produced by the genome at any one time #Transcriptomics JERM:00085 #Transcriptomics Transcriptomics #Translation JERM:00055 #Translation Translation #Translational_profiling The genome-wide measure of the nascent proteome #Translational_profiling JERM:00090 #Translational_profiling Translational Profiling #UPLC Ultra Performance Liquid Chromatography Liquid chromatography (LC) is a separation technique in which the mobile phase is a liquid #UPLC JERM:00109 #UPLC Ultra Performance Liquid Chromatography #UPLC UPLC #Volume JERM:110000 #Volume Volume #Western_blot JERM:00190 #Western_blot Western Blot #aerobic JERM:00175 #aerobic Aerobic #anaerobic JERM:00176 #anaerobic Anaerobic #autoCarbonSource Auto Carbon Response #biofilm JERM:00206 #biofilm Biofilm #carbonSourcePhenotype Carbon Source Phenotype #cell JERM:00199 #cell Cell #cell_type JERM:00157 #cell_type Cell Type #chemoenergy Chemo Energy #deletion JERM:00164 #deletion Deletion #developmentalStage JERM:00158 #developmentalStage Developmental Stage #diploid JERM:00171 #diploid Diploid #disease_state JERM:00159 #disease_state Disease State #electronDonorPhenotype Electron Donor Phenotype #energySourcePhenotype Energy Source Phenotype #experimental_assay JERM:00194 #experimental_assay Experimental Assay #explantation JERM:00160 #explantation Explanation #fermentation JERM:00177 #fermentation Fermentation #genotype A genotype is a variant genome, complete or incomplete - definition from the Sequence Ontology #genotype JERM:00161 #genotype Genotype #haploid JERM:00172 #haploid Haploid #heteroCarbonSource Hetero Carbon Source #hexaploid JERM:00173 #hexaploid Hexaploid #informatics_analysis JERM:00195 #informatics_analysis Informatics Analysis #informatics_analysis_type an informatics analysis is an "assay" performed in silico, employing informatics techniques to analyse data #informatics_analysis_type JERM:00045 #informatics_analysis_type Informatics Assay Type #insertion JERM:00165 #insertion Insertion #instrumentModel instrumentModel #lithoElectronDonor Litho Electron Donor #manufacturer manufacturer #material_type JERM:00162 #material_type links to CV in MGED and others #material_type Material Type #miRNA_microarray JERM:00133 #miRNA_microarray miRNA Microarray #modelling_analysis JERM:00196 #modelling_analysis Modelling Analysis #mutationType JERM:00163 #mutationType Mutation Type #organ JERM:00203 #organ Organ #organ_type JERM:00167 #organ_type Organ Type #organism_part JERM:00168 #organism_part links to CV in MGED and others #organism_part Organism Part #organoElectronDonor Organo Electron Donor #pH JERM:00035 #pH pH #phenotype JERM:00169 #phenotype Phenotype #photoEnergy Photo Energy #ploidy JERM:00170 #ploidy Ploidy #process experimental procedures #process JERM:00016 #process Process #qPCR quantitative real time polymerase chain reaction (Q-PCR/qPCR) or kinetic polymerase chain reaction, is based on PCR and is used to amplify and simultaneously quantify a targeted DNA molecule #qPCR JERM:00104 #qPCR also known as real-time PCR or quantative PCR #qPCR qPCR #qRT-PCR Reverse transcription polymerase chain reaction (RT-PCR) is a variant of polymerase chain reaction (PCR). In RT-PCR an RNA strand is first reverse transcribed into its DNA complement (complementary DNA, or cDNA) using the enzyme reverse transcriptase, and the resulting cDNA is amplified using traditional or real-time PCR. #qRT-PCR JERM:00105 #qRT-PCR Real-time reverse-transcription PCR, qRT-PCR #qRT-PCR qRT-PCR #respiration JERM:00174 #respiration Respiration #semi-aerobic JERM:00178 #semi-aerobic Semi-aerobic #sequenceAccession sequenceAccession #termsOfDistribution termsofDistribution #timepoint timepoint #tissue JERM:00207 #tissue Tissue #tissue_type JERM:00180 #tissue_type Tissue Type #treatment JERM:00197 #treatment Treatment #turbidostat a continuous culture device that has feedback between the turbidity of the culture vessel and the dilution rate #turbidostat JERM:023 #turbidostat Turboidostat #units units #version version #13C_radiolabelling JERM:00137 #16S_rRNA JERM:00215 #2D_gel_electrophoresis JERM:00115 #2D_gel_electrophoresis 2D Gel Electrophoresis #2-hybrid_system Two-hybrid screening (also known as yeast two-hybrid system or Y2H) is a molecular biology technique used to discover protein-protein interactions and protein-DNA interactions by testing for physical interactions #2-hybrid_system JERM:00106 #2-hybrid_system yeast 2 hybrid #2-hybrid_system 2-hybrid System #Sex/Gender JERM:00179 #Sex/Gender Sex / Gender